Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQII-----NGETESHFFGQIVIHVDKKEKAKLIIDGQQ------------RTSTAVIFLAA-------MRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDK------SYFSNRIQSVSSEQLGLQKATKSQKRIN--------FAYNYFYKKLEEEINSSDFLEDKYGLLK-------TFFSTFT--------------------EKCSVMFVETDDFNEAFIIFETLNARGK--DLETADLLKNHL-----FKIANKKVGEVKKN--------WKQMLEFIGTVDTTKYIRHFWNSQNVFIRE--KDLYKEIRK---KITTQFEAIIFIDDLVR-----LSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAK---SFYPIILAMVKKD-------------YGPNEIYEVLSAIEVLVVRNFV---ISGLVANKYE---------TEFSKIAFKIY--QEEVESVTEIINLIRT-----NIIADDVFLNNFSSF-------KTTNKLRLRYILKKINDSYSKEIAVLNDNNKIH--LEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQG-VAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEA--REVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37501 for 3867 contacts (-9.7/contact) +
2D Compatibility (PS) -56455 + (NN) -15500 + (LL) 784
1D Compatibility (HY) -27200 + (ID) 4050
Total energy: -139922.0 ( -36.18 by residue)
QMean score : 0.313
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