Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------MKKNTPEALIDLFEELK--NLFETDTSLNN-QNS-SRLQ-EILTTATIRVRKASQTVELEARSVFQNIHTL------CFVEKIHLNPEEANVLKE------IEKIALSKGFWGGMNTLNVTNQFPSN
2XL4 Chain:A ((26-172))
RPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRASEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLD-
General information:
TITO was launched using:
RESULT:
Template:
2XL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10163 for 619 contacts (-16.4/contact) +
2D Compatibility (PS) -11324 + (NN) -5914 + (LL) -80
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -32431.0 ( -52.39 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2XL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XL4-query.scw
PDB file :
Tito_Scwrl_2XL4.pdb
: