Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGI---GNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDE----PVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
1XIZ Chain:A ((-1-153))
AMQDIHFRRHYVRHLPKEVSQNDIIKALASPLINDGMVVSD--FADHVITREQNFPTGLPVEPVGVAIPHTDHKYVRQNAISVGILAEPVNFEDMGGEPDPVPVRVVFMLALGE---SNKQLNVLGWIMDVIQDEDFMQQLLVMNDDEIYQSIYTRISE--
General information:
TITO was launched using:
RESULT:
Template:
1XIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68164 for 1130 contacts (-60.3/contact) +
2D Compatibility (PS) -16259 + (NN) -8228 + (LL) 464
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -103487.0 ( -91.58 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1XIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XIZ-query.scw
PDB file :
Tito_Scwrl_1XIZ.pdb
: