Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGA---------DLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHENVINAAKKAG-VSYIAYTSFAGAD-K------STSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMP-MIGG---ALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAG-AGFPEILEL-SGPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
1QYC Chain:A ((5-253)) | SRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGS--LQIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLI---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114338 for 1686 contacts (-67.8/contact) +
2D Compatibility (PS) -24620 + (NN) -13258 + (LL) 3228
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -160338.0 ( -95.10 by residue)
QMean score : 0.519
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