Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNDMYNNIRLSVIQLIDSKKENLKENNIKLTIIKNEKDGYVVELDNDKCMAEIVVEEPTYTPYRYISFEVVSLMDGKVKIIY---SWYDDETSQ--WSDIEKELNKGIQFLNNFKTMEQ
1EW4 Chain:A ((1-106))
MNDSEFHRLADQLWLTIEERLDDW-DGDS---DIDCEINGGVLTITF-ENGSKIIINRQEPLHQVWLATKQ-----GGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR----
General information:
TITO was launched using:
RESULT:
Template:
1EW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9288 for 670 contacts (-13.9/contact) +
2D Compatibility (PS) -10729 + (NN) -2135 + (LL) 1236
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -24366.0 ( -36.37 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1EW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EW4-query.scw
PDB file :
Tito_Scwrl_1EW4.pdb
: