Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGV-SFSE-AE-IADLKAGYAKKIITPPYLLIVTTNIIGHG------KK---DFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFADDLGIPAEQKIVGTLHLTSLAEVPEAKPRRPLNEWVKNLADL
3GFA Chain:A ((2-197))MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQHIAGANYTV-EIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELCEWLNTD--SQLVAAISLGYPDEEPSRRPRLQLSDVTEW----


General information:
TITO was launched using:
RESULT:

Template: 3GFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82166 for 1353 contacts (-60.7/contact) +
2D Compatibility (PS) -19798 + (NN) -6663 + (LL) 812
1D Compatibility (HY) -8800 + (ID) 1900
Total energy: -118515.0 ( -87.59 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3GFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFA-query.scw
PDB file : Tito_Scwrl_3GFA.pdb: