Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR
2HS5 Chain:A ((27-228))
-----TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVP--TAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELMRSVWNEARLVFHVM--DDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQI--
General information:
TITO was launched using:
RESULT:
Template:
2HS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134613 for 1527 contacts (-88.2/contact) +
2D Compatibility (PS) -21773 + (NN) -9152 + (LL) 1356
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: -169532.0 ( -111.02 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2HS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HS5-query.scw
PDB file :
Tito_Scwrl_2HS5.pdb
: