Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAK-AKYEENFKKSLVALYRRGKTKH--------SICQEFNVPHSTFGKWIKKFNNEENIESNEILNILQAQ--ELKKQRVLLEEELSILTEAIAVFENPLPKNK---
2RN7 Chain:A ((1-108))
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPERENRELRRSNDILRLASAYFAKAEFDRLWKK
General information:
TITO was launched using:
RESULT:
Template:
2RN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18606 for 375 contacts (-49.6/contact) +
2D Compatibility (PS) -9067 + (NN) 2041 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -28332.0 ( -75.55 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2RN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RN7-query.scw
PDB file :
Tito_Scwrl_2RN7.pdb
: