Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVV-GKKQVEPKESLAEELVELPFISLLMENSPAP-LIKGE-ADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPE-SLG-KVE-VL-LKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNR-F-RDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET- |
| 4H3W Chain:A ((38-350)) | ----ESWVAPLGMGYVT-------SDDVVNVEVPSIREVDGAYVMIYDGEMIGSLRAASDV--EIASEDITTGDIDGLFDGDFVLA---LTNPHITLSNVNASLDCSLSIEAE---------NTSEATSSDFTLSTVSPNIWIGPLD--PTDAFFVNELPGIVQIVPQ-----------IHLSLSADSQWTNAPADALSELRYAVELPLTPAPEFSAVSVERIEDAFDEDFVDYI--FSDGSARIYGEVTNEMPFDMSIEMVIMD---ENNVPVDIQFPAQEVGQ-SGEVIFEITEDMPMDARHIDLNLHLT-------------GRDQGEA-------------LGQTTFNLLEGGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 157326 for 1831 contacts (85.9/contact) +
2D Compatibility (PS) -25952 + (NN) 17046 + (LL) 4412
1D Compatibility (HY) 8800 + (ID) 800
Total energy: 160832.0 ( 87.84 by residue)
QMean score : -0.068
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