Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPK-NWQTVQTKEGKKKITYSMHSVIITGFDK----NNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
| 3CBJ Chain:A ((162-228)) | -----------------------------------------------------------------------------------------------------------------------------------------------------SEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWN---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25958 for 307 contacts (-84.6/contact) +
2D Compatibility (PS) -6792 + (NN) -1699 + (LL) 11064
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -25035.0 ( -81.55 by residue)
QMean score : 0.305
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