Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPEKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIFFIVEGYAAVEL-EDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGM-IAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINK-KSPYRIDKDSLDI
3B02 Chain:A ((2-185))
------------------------KRFARKETIYLRGEEARTLYRLEEGLVRVVELLPD--GRLITLRHVLPGDYFGEEALEG--KAYRYTAEAMTEAVVQGLEPRAM------DHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSAR---DRQGIYVTVSHEEIADATASIRESVSKVLADLRREGLIATAYRRVYLLDLAALE-
General information:
TITO was launched using:
RESULT:
Template:
3B02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117659 for 1354 contacts (-86.9/contact) +
2D Compatibility (PS) -19067 + (NN) -1760 + (LL) 2976
1D Compatibility (HY) -1200 + (ID) 1500
Total energy: -138210.0 ( -102.08 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3B02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B02-query.scw
PDB file :
Tito_Scwrl_3B02.pdb
: