Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEYVDADGAEIAPSDILTDYHYVSTP------KDIPGYKLREIPHNATG-----NITDTGIIVRYIYDK-TIDVRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFG-----KPNQVTVNYLDENKTPIAPSLYLSGL--FNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIY-----------QKKAPEQA---PSMEPLPDPTVPE-----------SPQVEKSKIKKSKIETTEKRTTSKVKIA-PKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE------------------------------------------
4CI0 Chain:A ((2-386))----SERIVIS----------------------PTSRQEGHAELV----MEVDDEGIVTKGRYFSITPVRGLEKMVTGKAPETAPVMVQRICGVCPIPHTLASVEAIDDSLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAP-DFVPENLMADAINSVSEIRKNAQYVVDMVAGEGIHPSDVRIGGMADNITELARKRLYARLKQLKPKVNEHVELMIGLIEDKGLPEGLGVHNQPTLASHQIYGDRTKFDLDRFTEIMPESWYDDPEIAKRACSTIPLYDGRNVEVGPRARMVEFQGFKERGVVAQHVARALEMKTALSRAIEILDELDTSAPVRADFDERGTGK-----LGIGAIEAPRGLDVHMAKVENGKIQFYSALVPTTWNIPTMGPATEGFHHEYGPHVIRAYDPCLSCATH


General information:
TITO was launched using:
RESULT:

Template: 4CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8989 for 2253 contacts (4.0/contact) +
2D Compatibility (PS) -30153 + (NN) 6122 + (LL) 2828
1D Compatibility (HY) -5600 + (ID) 3100
Total energy: -20914.0 ( -9.28 by residue)
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_4CI0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CI0-query.scw
PDB file : Tito_Scwrl_4CI0.pdb: