Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIINENEQLVAETVSRRIIELV-----KEKPASLICIAGGDTPLLTIEALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICFFDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDDVTKRVMSKYFDT--DLPLTHGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAIPATLVK-DSNTMLVVDKIAASGVEA
1FS5 Chain:A ((1-248))
MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHV-DIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELK-
General information:
TITO was launched using:
RESULT:
Template:
1FS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199757 for 2044 contacts (-97.7/contact) +
2D Compatibility (PS) -25728 + (NN) -8746 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 2900
Total energy: -252523.0 ( -123.54 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_1FS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FS5-query.scw
PDB file :
Tito_Scwrl_1FS5.pdb
: