Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEIKIDSAATGTWNLGKPPHRGTQEVLKKHGVDYQAMRARKISDADFKEADFIIGMDQQNLADLNALNNNPDVI---IRSLMSFVSGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK
3JS5 Chain:A ((22-150))
-MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSI-SRPVVSSDFKNFDYIFAMDNDNYYEL--LDRCPEQYKQKIFKMVDFCTTIKTTEVPDPYYGGE----------------------
General information:
TITO was launched using:
RESULT:
Template:
3JS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41083 for 977 contacts (-42.1/contact) +
2D Compatibility (PS) -13765 + (NN) -8960 + (LL) 2512
1D Compatibility (HY) -13600 + (ID) 2300
Total energy: -77196.0 ( -79.01 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3JS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JS5-query.scw
PDB file :
Tito_Scwrl_3JS5.pdb
: