Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
4PPD Chain:D ((10-95))--EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILP-------


General information:
TITO was launched using:
RESULT:

Template: 4PPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38276 for 665 contacts (-57.6/contact) +
2D Compatibility (PS) -9502 + (NN) -4223 + (LL) 876
1D Compatibility (HY) -9200 + (ID) 3600
Total energy: -63925.0 ( -96.13 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_4PPD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PPD-query.scw
PDB file : Tito_Scwrl_4PPD.pdb: