Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRG--VKVDLYEMRPVKQTPAHHTDKFAELVCTNS-LRANGLTNAVGVIKEEMR-MLDSIIIEAADKASV--PAGGALAVDRHEFSGYITDKVKNHPLVTVHTE-------EVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
| 3C4A Chain:A ((1-151)) | --MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEV-L----GWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGELPLADYDLVVLANGVNHKT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37038 for 883 contacts (-41.9/contact) +
2D Compatibility (PS) -14091 + (NN) -3392 + (LL) 22116
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -37455.0 ( -42.42 by residue)
QMean score : 0.332
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