Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NOY Chain:C ((2-74))
-KQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNWTVLLDVEGKQQLVFKHAISTFSPQKNVALNP---
General information:
TITO was launched using:
RESULT:
Template:
4NOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41320 for 444 contacts (-93.1/contact) +
2D Compatibility (PS) -8004 + (NN) -1501 + (LL) 380
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -64845.0 ( -146.05 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_4NOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NOY-query.scw
PDB file :
Tito_Scwrl_4NOY.pdb
: