Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDD---EGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNIN--PEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNP-GGGLAKTGGYIAGK-EALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFG--V-----V---ADPTWDAP-------RTDLIQSISFHNK-EKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 1N8P Chain:A ((45-327)) | --------------------------------------------------GTYEYSRSQNPNRENLERAVAALENAQYGLA---FSSGSATTATILQS-LPQGSHAVS-IGDVYGGTHRYF------TKVANAHGVETSFTND------LLNDLPQLIKENTKLVWIETP----TNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYI-SNPLNFGADIVVHSATKYINGHSD-VVLGVLATNNKPLYERLQFLQNAIGA----IPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTR------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117703 for 2104 contacts (-55.9/contact) +
2D Compatibility (PS) -27916 + (NN) -13392 + (LL) 10508
1D Compatibility (HY) -4400 + (ID) 2650
Total energy: -155553.0 ( -73.93 by residue)
QMean score : 0.346
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