Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MTKSRFFSDVAETSSFVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKTLTANESVTWIQTDTAEAAAQGAILAVKNKEADILVKGFIPTATLMHHVLKKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIGITNPKIALLSAVE--EVTAKMPSTLEAQEVVQHFG-NQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRNDSP--ENKLASFILTVRLVEK--- |
| 4FYP Chain:A ((34-261)) | GLSINYPNCRSWHLGVETSNIIN----------FDTVPANCKAYVEDYLI---------TSKQYQYDSKTVNKEAYFYAKGLALKNDTV-------------------------------NVWIFDLD---------DTLLSSIPYYAKYGYGTEN-----------TAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKW---KHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPGRVFKLPNPLYYVPSLEHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -38052 for 1705 contacts (-22.3/contact) +
2D Compatibility (PS) -22305 + (NN) -333 + (LL) 5460
1D Compatibility (HY) -5600 + (ID) 2700
Total energy: -63530.0 ( -37.26 by residue)
QMean score : 0.328
|
|
|