Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREARNLSTRLRGKGIKQ-AATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH--SLQVGDDLIYAEKIVIATGATPSTL---KVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKLHI---KGKDS------FSLQTDLIIGATGRMPNIAHLSLENASIDYTKKG-IVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVN--EKITYPAIPSVVFTSPKLASIGISTEEAKAN-PE-KYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN
3DK9 Chain:A ((17-477))-AVASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN-TNVKGIYAVGDVC--GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL-


General information:
TITO was launched using:
RESULT:

Template: 3DK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232527 for 3786 contacts (-61.4/contact) +
2D Compatibility (PS) -47404 + (NN) -9849 + (LL) 360
1D Compatibility (HY) -26400 + (ID) 6000
Total energy: -321820.0 ( -85.00 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3DK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DK9-query.scw
PDB file : Tito_Scwrl_3DK9.pdb: