Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDL-KESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ
1GK6 Chain:A ((355-409))-----------------------------------------------------------------------MKQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLEGEES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9837 for 213 contacts (46.2/contact) +
2D Compatibility (PS) -5952 + (NN) -2840 + (LL) 12844
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 10289.0 ( 48.31 by residue)
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_1GK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GK6-query.scw
PDB file : Tito_Scwrl_1GK6.pdb: