Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQIWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEE-------------------------AVRQLYREMGIVYKRMPTWSVYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED |
2IH2 Chain:A ((21-169)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGT-------------------------------------AYRFVGVEIDPKALDLPPW----------AEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK--PGGVLVFVVPATWL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64228 for 897 contacts (-71.6/contact) +
2D Compatibility (PS) -13273 + (NN) -4965 + (LL) 18156
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -71510.0 ( -79.72 by residue)
QMean score : 0.505
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