Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEATGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYEIPLATNIGTAEILIRGLGAGFLDWRDLRRNDE
1S8A Chain:E ((13-129))
-HIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPQDPDVKALLRLATVWNIPVATNVATADFIIQS----------------
General information:
TITO was launched using:
RESULT:
Template:
1S8A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89738 for 912 contacts (-98.4/contact) +
2D Compatibility (PS) -12435 + (NN) -2119 + (LL) 920
1D Compatibility (HY) -13200 + (ID) 3150
Total energy: -119722.0 ( -131.27 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1S8A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S8A-query.scw
PDB file :
Tito_Scwrl_1S8A.pdb
: