Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNRFYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISH-DQATRIVDFLS-GTVYALGGDIQRVGNN--IFLCTPDNVEVDGSISEMLDEQNFM
3ZIG Chain:A ((4-85))
--------------------------------------------------------------KVVYIKKIVISTHADLKRVSDELKSGNIVIVELTPLEQKPELLKKIAEQLMTTASIIGGDYAKICGSPLKVILTPPEIKIAK------------
General information:
TITO was launched using:
RESULT:
Template:
3ZIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33232 for 510 contacts (-65.2/contact) +
2D Compatibility (PS) -8265 + (NN) -1866 + (LL) 5420
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -40193.0 ( -78.81 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIG-query.scw
PDB file :
Tito_Scwrl_3ZIG.pdb
: