Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQ----MVIVFIFLNALLLLPVS-AHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLEN------GAL---TDKNAHI-----------VEKTVNGVAGVNLTKAELSGAKNVINF-----KDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFL--SMVLMIGSIIFVSSLMLTVFTTLFIWMTKRS---SFSSIASFKESVNLTLNALGIPVIAACI---IGFIYFDITIIMAVQSLGMVLMIAWTF-LKTRFYKTSEKSMAASR----------------------------------------------------------------------- |
| 4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDIDYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135666 for 2065 contacts (-65.7/contact) +
2D Compatibility (PS) -28327 + (NN) -2573 + (LL) 0
1D Compatibility (HY) -23600 + (ID) 2150
Total energy: -192316.0 ( -93.13 by residue)
QMean score : 0.164
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