Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTKKRGLMLLAA-VLLTVCAIWE-YAMPTDAAVKSY---YVKVEDAGKPVQKNQFKGFKYVSNVY-DDKGKQ--KQLTFYSEKELTKN------EQFKVLVGENKMVVNYK--KIKNVPDKIKYLAEK
3F1Z Chain:A ((15-133))
----QPGDDAVASMQTYSVAQFLQPFTLNPAKASSDYLGKWVKVRGVIVDIRRKSGIAGSYYFIVTMRDEQNKTDKRLTFNFGSHNSADVEALSNGSVATIVGQVHQVQDSTIPTLQN-PKVVK-----
General information:
TITO was launched using:
RESULT:
Template:
3F1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1141 for 641 contacts (1.8/contact) +
2D Compatibility (PS) -10710 + (NN) 2056 + (LL) 1228
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -10135.0 ( -15.81 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_3F1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F1Z-query.scw
PDB file :
Tito_Scwrl_3F1Z.pdb
: