Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN
2GPT Chain:A ((228-509))--RRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHL--LVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGL-------TVVVIGAGGAGKALAYGAKEKGAKVV----IANRTYER--ELAEAIG--A-------LSLTDLDNY--E--DGMVLANTTSMGMQPNVEETPISKDAL-KHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAP----KELYWQ


General information:
TITO was launched using:
RESULT:

Template: 2GPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123511 for 2234 contacts (-55.3/contact) +
2D Compatibility (PS) -27009 + (NN) -7018 + (LL) 2736
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -176252.0 ( -78.90 by residue)
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_2GPT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GPT-query.scw
PDB file : Tito_Scwrl_2GPT.pdb: