Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVD-FQNKTSAIKEKVVGDV-LSNAKVY-FMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 2PVU Chain:A ((38-266)) | ------------------------------GATKKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAG-LDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGS--PVKNALDLKGKTIGVQNATTGQEAAEKLFGKG----PHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKYTEIYKKWFGKEPK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60803 for 1840 contacts (-33.0/contact) +
2D Compatibility (PS) -23689 + (NN) -4468 + (LL) 2312
1D Compatibility (HY) -11600 + (ID) 2550
Total energy: -100798.0 ( -54.78 by residue)
QMean score : 0.499
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