Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGM-STSLLVTKMRKAAEERGETCEIEAYSI------------------A-EVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
2ZKI Chain:A ((4-81))
KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVTLDDMRWADGFAIGSPTR---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19110 for 361 contacts (-52.9/contact) +
2D Compatibility (PS) -6132 + (NN) -442 + (LL) 2892
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -25492.0 ( -70.61 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2ZKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZKI-query.scw
PDB file :
Tito_Scwrl_2ZKI.pdb
: