Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETT-WLHEAAAGTIEP--EKLMYPLDKVVNDTKTTF-IQDTVVKINKDEKTVTLDA-----NGDISYDYLLIALGSEAETFGISGLK--EYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLPQFDAKLVDYGVGVLEDRGVEFHVGKPVKEATADGV--KYAESENEVREIKAATIIWAAGVRGNSVIEA-SGFE-AGRGRVKVNNNLTVPGNEEILIVGDCSLIINPANDR-PFPPTAQIAMQQADVAAVNLAKLVKGETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK |
| 3ICS Chain:A ((35-353)) | -GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE----------KKPRHATVIGGGFIGVEMVENLRER-------------GIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALE-ENGAVVRLKS--G-SVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGH----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187347 for 2507 contacts (-74.7/contact) +
2D Compatibility (PS) -33080 + (NN) -10791 + (LL) 5688
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -245330.0 ( -97.86 by residue)
QMean score : 0.519
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