Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNG-VQPLDPV-------------AIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKI--------WHGGIAIYGALI-----------------GAVLTAIIFSRIKKISFWQL-------ADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKI-------RRGELFLGYVIWYSFGRFFIEGMRTD-SLMWGDFRVSQALSLLLI-----------------VLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK-------------------------------- |
3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESIPAGEVELDFNLPETIAKPFADTVTSVGDRIQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYYDETPIPAHMSGALGIIGHMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTWNLDCSKLVWADHSSLSMIKRLASEKISQLVKQR-YRVTDAQGHVYSVSMPQLTDQALPDYYDSIPDVAPNSDQLRVLTAALQMSLAQFRNDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164567 for 1835 contacts (-89.7/contact) +
2D Compatibility (PS) -27529 + (NN) 5976 + (LL) 144
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: -189326.0 ( -103.17 by residue)
QMean score : 0.193
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