Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEITRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGLYRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRGARNMK--FMCLVAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK
1BD4 Chain:C ((48-242))---------------MTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT-


General information:
TITO was launched using:
RESULT:

Template: 1BD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144663 for 1438 contacts (-100.6/contact) +
2D Compatibility (PS) -20786 + (NN) -6003 + (LL) 1388
1D Compatibility (HY) -15200 + (ID) 3400
Total energy: -188664.0 ( -131.20 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_1BD4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BD4-query.scw
PDB file : Tito_Scwrl_1BD4.pdb: