Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEVEGVVQETLPNAMFNVELENGHKVLATVSGKIRMHYIRILPGDKVTVELSPYDL-TRGRITYRFK-----------------
1D7Q Chain:A ((31-112))
------GQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKV-WINTSDIILVGLRDYQ-DNKADVILKYNADEARSLKAYGELPEHA
General information:
TITO was launched using:
RESULT:
Template:
1D7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31303 for 434 contacts (-72.1/contact) +
2D Compatibility (PS) -7059 + (NN) -877 + (LL) 1016
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -42123.0 ( -97.06 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1D7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7Q-query.scw
PDB file :
Tito_Scwrl_1D7Q.pdb
: