Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVG-VLKEEIYSK
4QYI Chain:E ((7-177))
----EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASS----TETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIASVVT------
General information:
TITO was launched using:
RESULT:
Template:
4QYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120902 for 1271 contacts (-95.1/contact) +
2D Compatibility (PS) -18102 + (NN) -5869 + (LL) 740
1D Compatibility (HY) -20000 + (ID) 4100
Total energy: -168233.0 ( -132.36 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_4QYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QYI-query.scw
PDB file :
Tito_Scwrl_4QYI.pdb
: