Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIAVFASANGSNFQVIAEQF-------PVSFVFSDHRDAYVLERAQNLAIPSFAFELKEFENKAAYEQAVVDLLDKHEIDLVCLAGYMKIVGETLLSAYEGRIINIHPTYLPEFPGAHGIKDAWEAGVDQSGVTIHWVDSGVDTGQVIQQVHVPRLADDSLESFETRIHETEYQLYPAVLDSLGIKRK
4EW2 Chain:A ((2-181))
-RVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLS-RVKLAEHKIFPAALQLVASGTV
General information:
TITO was launched using:
RESULT:
Template:
4EW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132091 for 1369 contacts (-96.5/contact) +
2D Compatibility (PS) -19036 + (NN) -10850 + (LL) 260
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -179767.0 ( -131.31 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4EW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EW2-query.scw
PDB file :
Tito_Scwrl_4EW2.pdb
: