Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIYDHLLNLTHYKDINP---NLDLAIDYLLSHDLR-------NLDI---------------GTYHISPEVILMVQSNQLSESFDHIFEYHKKYLDIHYVIEGH----EVIKL------GKGDKVEVEEYLGDIGF-IKCSEETSFDLRDNYIAFFFPEEAHQ---PNGMGSLGNYVKKGVLKVLMA------- |
| 3J6V Chain:J ((1-201)) | MAVRAVFGALGRRLWQGSKNFSVSSSRSNIAKNDGFLLSTSMKWVQFSNLHVDVPKDLTKPTITISDEPDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHIKKPVWETTPEEKGDSKS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36070 for 864 contacts (-41.7/contact) +
2D Compatibility (PS) -15206 + (NN) 2927 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -55249.0 ( -63.95 by residue)
QMean score : 0.200
|
|
|