Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANVKLFDQTGKEVSSVELNEAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQ---GSIRSPQWRGGGVVFGPTP-RSYGYKLPQKVRRLALKSVYSAKVAEDKFVA-------------VENLSFAAPKTAEFASVLSALSIDSKVLVI----LEEGNEFAA-------------------LSARNLPNVTVATATTASVLDIVNADK----LLVTKEAISTIEGVLA |
| 1JJ2 Chain:C ((1-246)) | -MQATIYDLDGNTDGEVDLP-DVFETPVRSDLIGKAVRAAQANRKQ-DYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36940 for 1267 contacts (-29.2/contact) +
2D Compatibility (PS) -21515 + (NN) -8086 + (LL) 460
1D Compatibility (HY) 400 + (ID) 2150
Total energy: -67831.0 ( -53.54 by residue)
QMean score : 0.435
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