Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILDYNKLKQETKAIVVDI--IERSALKKGQIFVLGLSS---SEVSGGLIGKNSSSEIGEIIVEVILKELHSRGIYLAVQGCEHVNRALVVEAELAERQQLEVVNVVPNLHAGGSG-----------QVAAFKLMTSP----VEVEEIVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGARA-GY----TSDPIRKF------------- |
| 4OHC Chain:A ((10-230)) | TGYDRQSISDTTAKILLEVQAVHFNA-EKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQID-AVAGGE--TAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFHYN-IFKESVSVLKDID-VDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67220 for 1362 contacts (-49.4/contact) +
2D Compatibility (PS) -19241 + (NN) 183 + (LL) 516
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: -97212.0 ( -71.37 by residue)
QMean score : 0.420
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