Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKGNKKLNSSKLGDYTPLEFGSIFLRIVKLLSDFIYVIILLFVMLGVGLAVGYLASQVDSVKVPSKNSLVTQVNTLTRVSRLTYSDKSQISEIDTDLQRTPVAKDAISDNIKKAIIATEDENFNDHKGVVPKAVLRAAAGSVLGFGESSGGSTLTQQLLKQQILGDDPSFKRKSKEIIYALALERYMDKDSILSDYLNVSPFGRNNKGQNIAGIEEAAQGIFGVSAKDLTIPQAAFLAGLPQSPIVYSPYTADAQLKSDKDLSFGIKRQKNVLYNMYRTRALTKDEYKSYKDYDIKKDFIKPAVATTNHHDYLYYSALSE-AQKVMYNYLIKKDNVSEHDLKND-ETRATYRHRAIEEIQQGGYTIKTTINKSVYQAMQDAAAQYGGLLDDGTGKVQMGNVLTDNSSGAIIGFIGGRNYSENQ---------------------NNHAFDTARSPGSSIKPILPYGIAIDQGMLGSGSVLSNYPT------TYSSGEKIMHADEEGTAMVNLQESLDISWNIPAFWTYKMLRDRGVDVKNYMEKLDYPIE---N----------------FGIESLPLGG-GIDTSVAQQTNLYQMIANGGVYHKQYMIESIEDSNGKVIYNHESKPVRVFSKATATILQQLLHGPINSGKTTTFKNRLQGLNSGLAGVDWIGKTGTTNS--TSDVWLMLST---PKVTLGGWAGHDNNASLAKLTGYNNNANYMAHLVNAINNADGNTFGKSERFRLDDSVIKAKVLKSTGLQPGVVTVNGRRITVGGESTTSYWAKNGPGTMTYRFAIGGTDSDYQKAWSTLGGKR |
| 1VQQ Chain:A ((215-639)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETESRNYPLEK---------------ATSHLLGY---VGPINSEELKQKEYKG----YK------------DDAVIGKKGLEKLYDKKLQHEDGYRVTIVDD-SNTIAHT---LIEKKKKDGKDIQLTIDAKVQKSIYNNMKN-----------DYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNK-FQITTSPGSTQKILT-AMIGLNNKTLDDKTSYKIDGKGWQKDKSW-GGYNVTRYE-VVNGNIDLKQAIESSDNIFFARVA-LELGS-KKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKV---------WKKNIISKENINLLTDGMQQVVNK-THKEDI--------YRSYANLIGKSGTAELKGRQIGWFISYDKDNPNMMMAINVKDVQDK-----GMASYNAKISGKVYDELYENGNKKYDIDE-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91227 for 2992 contacts (-30.5/contact) +
2D Compatibility (PS) -37907 + (NN) -6094 + (LL) 21416
1D Compatibility (HY) -4000 + (ID) 2700
Total energy: -120512.0 ( -40.28 by residue)
QMean score : 0.358
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