Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMK---RPYRYDYGQFTFLKIYQAGFESAAHPFSISGGHD--RVIFLTVKAS-----------GDYTKSIYKQLKVGTKIALDRAYGHMLFD--------K---------DKKEQVWIAGGIGITPFISFIRENSIL---TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSS-------LQGRLDFS---QSVF--EGQPTIFMCGPTSMTSTYA-KVFRQKD-AKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 3W5H Chain:A ((13-270)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDG-NLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLE-SMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERVGHPKERCFAF-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124957 for 1547 contacts (-80.8/contact) +
2D Compatibility (PS) -22080 + (NN) -118 + (LL) 22020
1D Compatibility (HY) -12800 + (ID) 2250
Total energy: -140185.0 ( -90.62 by residue)
QMean score : 0.512
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