Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDTLIIGSGPGGMTAALYAARSNLKV----GLIEQG-APGGQMNNTAEIENYPGY-DHISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITE-DESYEAKT---VILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGA--FFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLT-DTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF
3ITJ Chain:D ((27-335))-----IIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------RAEKNEKIEILYNTVALEAKG----LNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL-


General information:
TITO was launched using:
RESULT:

Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140345 for 2449 contacts (-57.3/contact) +
2D Compatibility (PS) -30167 + (NN) -1796 + (LL) 1444
1D Compatibility (HY) -15600 + (ID) 6200
Total energy: -192664.0 ( -78.67 by residue)
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3ITJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ITJ-query.scw
PDB file : Tito_Scwrl_3ITJ.pdb: