Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYDTLIIGSGPGGMTAALYAARSNLKV----GLIEQG-APGGQMNNTAEIENYPGY-DHISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITE-DESYEAKT---VILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGA--FFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLT-DTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF |
3ITJ Chain:D ((27-335)) | -----IIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------RAEKNEKIEILYNTVALEAKG----LNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140345 for 2449 contacts (-57.3/contact) +
2D Compatibility (PS) -30167 + (NN) -1796 + (LL) 1444
1D Compatibility (HY) -15600 + (ID) 6200
Total energy: -192664.0 ( -78.67 by residue)
QMean score : 0.353
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