Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLG-QTPLILCDDVVYNIVGERFLSYLQ-DDLLPHRVSFNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKVNLPVVIAPTVASTDAPTSALSVIYTDEGAFEKYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENR--P--------------KEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDRYVSNHQ |
| 3JZD Chain:A ((12-354)) | ----AHAARVVFGAGSSSQVAAEVERLGAKRALVLCTPNQQA-EAERIADLLGPLSAG-VYAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIALETGMPIVAIPTTY-AGSEVTPVYGLTEA-GTKRTGRDPRVLPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEGLYARDAN----------PVMSLMAEEGIRALAAGIPAVFNDP---ADLDARSQCLYGA-WLCGTVLGGVGMALHHKLCHTLGGSF----NLPHAETHTIVLPHALAYNAAAVPEAMARIRRATGAGEQSAAATLFDLAQRHGAPVALRDIGMRE---EDLDRAADIALAS---PYWNPRPIEREPIRALLQAAYEGVRPD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168061 for 3009 contacts (-55.9/contact) +
2D Compatibility (PS) -34917 + (NN) -13068 + (LL) 1840
1D Compatibility (HY) 4800 + (ID) 3200
Total energy: -212606.0 ( -70.66 by residue)
QMean score : 0.553
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