Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEI--GRHSSPG-DAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKE--AFQMLLVVVKPEV
2GU9 Chain:A ((11-99))
--------------------------AFKVLFSLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPPAY
General information:
TITO was launched using:
RESULT:
Template:
2GU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56576 for 559 contacts (-101.2/contact) +
2D Compatibility (PS) -8925 + (NN) 3026 + (LL) 2832
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -62593.0 ( -111.97 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2GU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GU9-query.scw
PDB file :
Tito_Scwrl_2GU9.pdb
: