Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVLVSSLLVLGITITLQTVVEAKGPKVAYTQEGMTALSDTNKDKVTTISIDEIQKSLEGKKPITVSFDIDDTLLFSSQYFQYGKEYVTPGSFDFLHKQKFWDLVAKRGDQDSIPKEYAKKLIAMHQKRGDKIVFITGRTRGSMYKEGEVDKTAKALAKDFKLD----KPIAVNYTGDKPKKPYKYDKSYYIKKYGSDIHYGDSDDDIHAAREAGARPIRILRAPNSTNLPLPEAGGYGEEVLENSAY
1RMT Chain:B ((24-212))-------------------------------------------------VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS------PTKTETVSKTLADNFHIPATNMNPVI--FAGDKPG---QNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY


General information:
TITO was launched using:
RESULT:

Template: 1RMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23498 for 1516 contacts (-15.5/contact) +
2D Compatibility (PS) -20570 + (NN) -15200 + (LL) 4416
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -73402.0 ( -48.42 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_1RMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RMT-query.scw
PDB file : Tito_Scwrl_1RMT.pdb: