Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERI-GGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAFP-TDYYRALIPSDVVVAQKPGYVR--EALNVGAIVK-E-EVPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 1BUE Chain:A ((28-289)) | ----------------------------------------------------------------------------------------------KGIDEIKNLETDF---NGRIGVYALDTGSGKSFSYRANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVNYNTRSLEFHSPITT-KYK--DNGMSLGDMAAAALQYSDNGATNIILE-YIGGPEGMTKFMRSIGDEDFRLDRWELDLNTAIPGDERDTSTPAAVAKSLKTLALGNILSEHEKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAYGTANDYAVVWPKNRAPLIISVYTTKNEKEAKHEDKV----IAEASRIAIDNLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122812 for 2052 contacts (-59.8/contact) +
2D Compatibility (PS) -24926 + (NN) 902 + (LL) 9372
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -143764.0 ( -70.06 by residue)
QMean score : 0.373
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