Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MEVIREQEF-VNQYHYDARNLEWEEENGTPKTNFEVTFQLANRDEAAKVTSIVAVLQFVIVRDEFVISGVISQMAHIQGRLINEPSEFSQD--EVENLAAPLLEIVKRLT--------------YEVTEIALDRPGVTLEFNS
3D7J Chain:A ((19-152))
SHMFSITVRDHIMIAHSFRGDVF---GPAQRLHGATFLVDATFRREQLDED---------NIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL
General information:
TITO was launched using:
RESULT:
Template:
3D7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39462 for 762 contacts (-51.8/contact) +
2D Compatibility (PS) -11963 + (NN) -808 + (LL) 1680
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -53103.0 ( -69.69 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_3D7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D7J-query.scw
PDB file :
Tito_Scwrl_3D7J.pdb
: