Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILREFCAENLTDLTRLDKAIISRVELCDNLAAGGTTPS----YGVIKEANQYLH-EKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ----GLPLVFHMAFDVIPKSDQKKAIDQLVALGFTRILLHG------SSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVRQAHGTRITQ
3OVP Chain:A ((22-198))
------------ECLRMLDSGADYLHLDVM--DGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKP--------------EQWVKPMAVAGANQYTFHLEATEN------PGALIKDIRENGMKVGLAIKPG-------TSVEYLAPW-ANQIDMALVMTVEPGFGGQ--KFMEDMMPKVHWLRTQ-FPSLDIEVDGGVGPDTVHKCAE-AGANMIVSGSAIM
General information:
TITO was launched using:
RESULT:
Template:
3OVP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88823 for 1250 contacts (-71.1/contact) +
2D Compatibility (PS) -17231 + (NN) -5092 + (LL) 3508
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -114238.0 ( -91.39 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_3OVP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVP-query.scw
PDB file :
Tito_Scwrl_3OVP.pdb
: