Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEAT-ELHEVAAGSQPK--EKITFPIKDVINTNKVNF-MQDEVLKVDAENKTVTVKN-----NGELHYDYVVVALGFVSETFGIKGAME--NALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILPMFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEV--VYGTSKEDEELKSITAGTIIWTTGVSGSPVMG-ESGFD-QRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGR-PFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
| 3ICS Chain:A ((36-353)) | SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE----------KKPRHATVIGGGFIGVEMVENLRER-------------GIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALE-ENGAVVRLKS--G---SVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -233770 for 2506 contacts (-93.3/contact) +
2D Compatibility (PS) -33084 + (NN) -13073 + (LL) 1880
1D Compatibility (HY) -14000 + (ID) 3450
Total energy: -295497.0 ( -117.92 by residue)
QMean score : 0.554
|
|
|