Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNKGAHPELLNALIETNDQ---GLSGYGTDSYCQQAADKIREVCSCPQAEVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEFSGHKVLTLPSHNGKLLASEVATYIETFYADGNYQHMVFPGMVY-ISHP-TEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAK-DTDVDFPTIA----ALSDVFYIGGTKMGA-LAGEAVVFTKKNRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTDD---LYLKIGKHAIDLAEELKIILE-E-K-GYSFYLKSPTNQQFVIVE-----NTKLTDLAK-NVAYSFWEKYD---DHHTVIRLATSWSTSREDVTALRNVL |
| 2ZYJ Chain:A ((48-386)) | -----------PKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGA--IQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRE----------RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFE--LAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAK--QGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142675 for 2589 contacts (-55.1/contact) +
2D Compatibility (PS) -34262 + (NN) -11828 + (LL) 1272
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -198793.0 ( -76.78 by residue)
QMean score : 0.490
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