Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNKIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKH--SKLVFDCHLMVVDPERYIEDFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVESLIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTIKAAAEAGANVFVAGSYLFKASDLPAQVETLRVALDD
3OVQ Chain:B ((5-214))
---CKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH----WLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE
General information:
TITO was launched using:
RESULT:
Template:
3OVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173865 for 1793 contacts (-97.0/contact) +
2D Compatibility (PS) -22878 + (NN) -11371 + (LL) 764
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -232600.0 ( -129.73 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_3OVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVQ-query.scw
PDB file :
Tito_Scwrl_3OVQ.pdb
: